STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbll1Cbl proto-oncogene like 1. (496 aa)    
Predicted Functional Partners:
wtap
WT1 associated protein.
    
 
 0.971
virma
Vir like m6A methyltransferase associated.
    
 
 0.956
ENSSAUP00010021796
annotation not available
    
 
 0.915
LOC115596880
B-cadherin-like.
    
 
 0.738
LOC115586944
B-cadherin-like.
    
 
 0.738
ENSSAUP00010037084
Zinc finger CCCH-type containing 13.
    
 
 0.709
LOC115597493
SERTA domain-containing protein 4-like.
    
  0.698
mettl3
Methyltransferase like 3.
    
 
 0.678
mettl14
Methyltransferase like 14.
    
 
 0.678
UBQLN4
Ubiquilin-4-like.
     
 0.583
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.