STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrp5LDL receptor related protein 5. (1648 aa)    
Predicted Functional Partners:
LOC115596278
Dickkopf-related protein 1-like.
    
 0.986
sost
Sclerostin.
    
 0.946
wnt1
Wnt family member 1.
    
 0.937
wnt3a
Wnt family member 3A.
    
 0.916
fzd4
Frizzled class receptor 4.
    
 0.916
LOC115571765
Proto-oncogene Wnt-3.
    
 0.913
ENSSAUP00010028123
Wingless-type MMTV integration site family, member 11.
    
 0.894
LOC115590035
Dickkopf-related protein 2-like.
    
 0.893
dkk2
Dickkopf WNT signaling pathway inhibitor 2.
    
 0.893
wnt6
Wnt family member 6.
    
 0.891
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.