STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115580198Fin bud initiation factor-like. (207 aa)    
Predicted Functional Partners:
LOC115586725
Unique cartilage matrix-associated protein-like.
      
 0.534
LOC115587361
Harmonin-like.
      
 0.529
LOC115586469
CD81 antigen-like.
      
 0.476
cd81
CD81 molecule.
      
 0.476
ENSSAUP00010008273
Secretion regulating guanine nucleotide exchange factor.
      
 0.472
ENSSAUP00010000767
annotation not available
      
 0.459
znf536
Zinc finger protein 536.
      
 0.459
ENSSAUP00010061802
TBC1 domain family, member 15.
      
 0.452
tmem204
Transmembrane protein 204.
  
   
 0.434
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.