STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010059556annotation not available (347 aa)    
Predicted Functional Partners:
LOC115567630
Cyclin-dependent kinase 14.
    
 
 0.520
ENSSAUP00010067769
Cyclin-dependent kinase 15.
    
 
 0.520
LOC115586283
Cyclin-dependent kinase 17-like.
    
 
 0.495
cdk18
Cyclin dependent kinase 18.
    
 
 0.495
LOC115585590
Cyclin-dependent kinase 17-like.
    
 
 0.495
LOC115584753
Cyclin-dependent kinase 16-like.
    
 
 0.495
LOC115595403
Cyclin-dependent kinase 17.
    
 
 0.495
cdk6
Cyclin dependent kinase 6.
    
 
 0.414
LOC115577719
Cyclin-dependent kinase 2-like.
    
 
 0.414
cdk1
Cyclin dependent kinase 1.
    
 
 0.414
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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