STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xrcc2X-ray repair cross complementing 2. (294 aa)    
Predicted Functional Partners:
rad51d
RAD51 paralog D.
   
 0.991
rad51c
RAD51 paralog C.
   
0.983
rad51
RAD51 recombinase.
   
0.951
ENSSAUP00010030469
X-ray repair complementing defective repair in Chinese hamster cells 3.
   
 0.943
dmc1
DNA meiotic recombinase 1.
   
 0.926
knl1
Kinetochore scaffold 1.
   
 0.919
ENSSAUP00010031327
BRCA2 DNA repair associated.
    
 0.875
mre11
MRE11 homolog, double strand break repair nuclease.
   
 
 0.836
fancm
FA complementation group M.
   
 
 0.828
brca1
BRCA1 DNA repair associated.
   
 
 0.819
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.