STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115584065Transmembrane protein 198-like. (342 aa)    
Predicted Functional Partners:
appl1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 0.875
ENSSAUP00010064486
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 0.875
ENSSAUP00010028500
Apoptotic peptidase activating factor 1.
    
 0.872
ENSSAUP00010023041
Baculoviral IAP repeat containing 6.
   
 0.775
LOC115585587
Baculoviral IAP repeat-containing protein 7-like.
   
 0.718
LOC115594258
Inhibitor of apoptosis protein-like.
   
 0.718
xiap
X-linked inhibitor of apoptosis.
   
 0.718
ENSSAUP00010054946
Excision repair cross-complementation group 3.
 
 
    0.712
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
  0.692
ripk4
Receptor interacting serine/threonine kinase 4.
    
 0.638
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.