STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010060962Abhydrolase domain containing 6b. (340 aa)    
Predicted Functional Partners:
palb2
Partner and localizer of BRCA2.
   
 0.828
ndufab1
NADH:ubiquinone oxidoreductase subunit AB1.
   
 0.828
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.728
aasdh
Aminoadipate-semialdehyde dehydrogenase.
    
 0.715
ENSSAUP00010035026
Isochorismatase domain containing 2.
  
 0.696
oxct1
3-oxoacid CoA-transferase 1.
  
 
 0.673
acads
acyl-CoA dehydrogenase short chain.
  
 0.668
acadsb
acyl-CoA dehydrogenase short/branched chain.
  
 0.668
acadl
acyl-CoA dehydrogenase long chain.
  
 0.666
adsl
Adenylosuccinate lyase.
    
 0.663
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.