STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115585481Transcriptional enhancer factor TEF-5-like. (470 aa)    
Predicted Functional Partners:
yap1
Yes associated protein 1.
   
 0.961
vgll2
Vestigial like family member 2.
    
 
 0.824
vgll4
Vestigial like family member 4.
    
 
 0.767
LOC115584731
Transcription cofactor vestigial-like protein 4.
    
 
 0.767
lef1
Lymphoid enhancer binding factor 1.
    
  0.753
LOC115594041
Transcription factor 7-like 2.
    
  0.753
ENSSAUP00010018920
annotation not available
    
 
 0.747
LOC115581147
Transcription cofactor vestigial-like protein 4.
    
 
 0.711
ENSSAUP00010033946
Insulinoma-associated 1a.
    
 
 0.642
INSM2
INSM transcriptional repressor 2.
    
 
 0.642
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.