STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutccutC copper transporter. (251 aa)    
Predicted Functional Partners:
LOC115591212
Allantoinase, mitochondrial-like.
    
  0.788
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
  
 0.621
ENSSAUP00010018432
Methionine adenosyltransferase II, alpha b.
  
    0.585
LOC115592803
S-adenosylmethionine synthase-like.
  
    0.585
LOC115571617
S-adenosylmethionine synthase-like.
  
    0.585
ENSSAUP00010063394
annotation not available
  
    0.585
LOC115596589
S-adenosylmethionine synthase-like.
  
    0.585
atp7a
ATPase copper transporting alpha.
     
 0.584
LOC115577351
Copper-transporting ATPase 2-like.
     
 0.584
ENSSAUP00010026142
Copper chaperone for superoxide dismutase.
     
 0.582
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.