STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115583561Cytochrome b561 domain-containing protein 2. (223 aa)    
Predicted Functional Partners:
ENSSAUP00010046194
annotation not available
    
  0.844
ENSSAUP00010005855
Integrator complex subunit 3.
   
   0.714
ints5
Integrator complex subunit 5.
   
   0.712
ENSSAUP00010007006
Integrator complex subunit 1.
    
   0.711
ENSSAUP00010046198
annotation not available
    
  0.588
LOC115587574
Thioredoxin domain-containing protein 3 homolog.
    
 0.578
bard1
BRCA1 associated RING domain 1.
    
  0.577
YTHDC2
YTH domain containing 2.
    
  0.548
mrps11
Mitochondrial ribosomal protein S11.
   
  0.547
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
   
  0.545
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.