STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndufa4NDUFA4 mitochondrial complex associated. (82 aa)    
Predicted Functional Partners:
LOC115581096
Cytochrome c oxidase subunit 7C, mitochondrial.
   
 0.992
ndufa12
NADH:ubiquinone oxidoreductase subunit A12.
   
 0.991
ndufa6
NADH:ubiquinone oxidoreductase subunit A6.
   
 0.990
ndufa2
NADH:ubiquinone oxidoreductase subunit A2.
   
 0.986
ndufb9
NADH:ubiquinone oxidoreductase subunit B9.
   
 0.983
ndufb8
NADH:ubiquinone oxidoreductase subunit B8.
   
 0.978
LOC115569772
NADH dehydrogenase [ubiquinone] 1 subunit C2-like.
   
 0.977
ndufa7
NADH:ubiquinone oxidoreductase subunit A7.
   
 0.976
ndufb5
NADH:ubiquinone oxidoreductase subunit B5.
   
 0.975
LOC115583296
Cytochrome c oxidase subunit 6C-1.
   
 0.970
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.