STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lcmt2Leucine carboxyl methyltransferase 2. (704 aa)    
Predicted Functional Partners:
PPP2CA
Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform-like.
    
 0.914
LOC115581371
Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform.
    
 0.914
ppp2ca
Protein phosphatase 2 catalytic subunit alpha.
    
 0.914
tyw5
tRNA-yW synthesizing protein 5.
 
    
 0.876
ppp4c
Protein phosphatase 4 catalytic subunit.
    
 0.835
ENSSAUP00010055124
Protein phosphatase 2, regulatory subunit B, alpha a.
    
 0.785
LOC115592447
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform.
    
 0.785
ENSSAUP00010069384
Protein phosphatase 2, regulatory subunit B, gamma a.
    
 0.785
ptpa
Protein phosphatase 2 phosphatase activator.
    
 
 0.765
fnbp4
Formin binding protein 4.
    
 0.754
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.