STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115576173GTPase IMAP family member 8-like. (922 aa)    
Predicted Functional Partners:
espl1
Extra spindle pole bodies like 1, separase.
    
 0.647
PLK1
Polo like kinase 1.
    
 0.588
plk2
Polo like kinase 2.
    
 0.588
plk4
Polo like kinase 4.
    
 0.588
plk3
Polo like kinase 3.
    
 0.588
ENSSAUP00010045165
Cytoskeleton associated protein 5.
    
 
 0.582
LOC115587360
P53-induced death domain-containing protein 1-like.
    
  0.564
ENSSAUP00010068935
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.553
ripk4
Receptor interacting serine/threonine kinase 4.
    
 0.551
ENSSAUP00010055124
Protein phosphatase 2, regulatory subunit B, alpha a.
    
 0.535
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.