STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115594309Solute carrier family 25 member 35. (298 aa)    
Predicted Functional Partners:
palb2
Partner and localizer of BRCA2.
    
   0.590
ndufab1
NADH:ubiquinone oxidoreductase subunit AB1.
    
   0.590
ENSSAUP00010046106
Malate dehydrogenase 2, NAD (mitochondrial).
    
   0.477
svopl
SVOP like.
      
 0.474
yeats4
YEATS domain containing 4.
 
      0.433
ENSSAUP00010064796
annotation not available
 
    
 0.417
slc22a15
Solute carrier family 22 member 15.
   
  
 0.405
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.