STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010062638annotation not available (1400 aa)    
Predicted Functional Partners:
ENSSAUP00010036878
Tumor protein p53 binding protein, 1.
    
 0.976
ENSSAUP00010061174
ATM serine/threonine kinase.
   
 0.972
ENSSAUP00010057421
annotation not available
   
 0.952
rnf8
Ring finger protein 8.
    
 0.940
rbbp5
RB binding protein 5, histone lysine methyltransferase complex subunit.
   
 0.935
kdm6a
Lysine demethylase 6A.
    
 0.927
LOC115577314
Histone demethylase UTY-like.
    
 0.927
LOC115593995
Lysine-specific demethylase 6B-like.
    
 0.925
kdm6b
Lysine demethylase 6B.
    
 0.925
brca1
BRCA1 DNA repair associated.
   
 0.921
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.