STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
synj2bpSynaptojanin 2 binding protein. (146 aa)    
Predicted Functional Partners:
ENSSAUP00010002601
annotation not available
    
 0.825
SLCO5A1
Solute carrier organic anion transporter family member 5A1.
    
   0.789
ift172
Intraflagellar transport 172.
    
 0.747
ift80
Intraflagellar transport 80.
    
 0.745
traf3ip1
TRAF3 interacting protein 1.
    
 0.742
LOC115584378
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3-like.
    
0.737
LOC115583853
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3-like.
    
0.737
cluap1
Clusterin associated protein 1.
    
 0.717
ift88
Intraflagellar transport 88.
    
 0.708
prkcz
Protein kinase C zeta.
    
 0.699
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.