STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115586657Peroxisomal succinyl-coenzyme A thioesterase-like. (441 aa)    
Predicted Functional Partners:
scp2
Sterol carrier protein 2.
  
 
 0.899
acot8
acyl-CoA thioesterase 8.
     
 0.825
acot7
acyl-CoA thioesterase 7.
  
 
 0.814
LOC115566631
Acyl-coenzyme A thioesterase THEM4-like.
     
 0.797
LOC115595289
Peroxisomal succinyl-coenzyme A thioesterase-like.
  
  
 
0.787
LOC115573340
Glutamate decarboxylase 1-like.
   
 
  0.786
ENSSAUP00010032261
Phosphofructokinase, muscle b.
    
  0.785
gad2
Glutamate decarboxylase 2.
   
 
  0.781
csad
Cysteine sulfinic acid decarboxylase.
   
 
  0.781
LOC115583369
Peroxisomal succinyl-coenzyme A thioesterase-like.
  
 
 
0.760
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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