STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIPR1GLI pathogenesis related 1. (276 aa)    
Predicted Functional Partners:
ENSSAUP00010053745
Phosphoribosylglycinamide formyltransferase.
    
  0.849
ENSSAUP00010005716
Phosphoribosyl pyrophosphate amidotransferase.
    
  0.657
pc
Pyruvate carboxylase.
    
  0.581
nanp
N-acetylneuraminic acid phosphatase.
     
 0.577
CMAS
Cytidine monophosphate N-acetylneuraminic acid synthetase.
     
 0.577
l2hgdh
L-2-hydroxyglutarate dehydrogenase.
    
  0.555
cct2
Chaperonin containing TCP1 subunit 2.
   
 
 0.548
glipr2
GLI pathogenesis related 2.
  
  
 0.541
ndufv2
NADH:ubiquinone oxidoreductase core subunit V2.
    
  0.535
LOC115568837
Malate synthase, glyoxysomal-like.
    
  0.534
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.