STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010063502WW domain containing adaptor with coiled-coil a. (594 aa)    
Predicted Functional Partners:
ENSSAUP00010055094
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.981
LOC115594409
U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like.
    
 
 0.933
cdc5l
Cell division cycle 5 like.
   
 
 0.913
LOC115573795
RNA-binding protein 25-like.
   
 
 0.889
ENSSAUP00010063450
RNA binding motif protein 25a.
   
 
 0.889
sf3b3
Splicing factor 3b subunit 3.
    
 
 0.882
sart1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
   0.882
ddx46
DEAD-box helicase 46.
   
 
 0.880
snrpe
Small nuclear ribonucleoprotein polypeptide E.
    
 
 0.879
ENSSAUP00010034328
Ring finger protein 40.
   
 0.869
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.