STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115597640Sentrin-specific protease 2-like. (604 aa)    
Predicted Functional Partners:
sumo1
Small ubiquitin like modifier 1.
    
 0.974
ipo5
Importin 5.
    
 
 0.932
LOC115565983
Small ubiquitin-related modifier 3.
    
 0.917
LOC115586487
Small ubiquitin-related modifier 2.
    
 0.917
ENSSAUP00010048289
Small ubiquitin like modifier 2b.
    
 0.917
ENSSAUP00010067766
annotation not available
    
 0.917
nup153
Nucleoporin 153.
   
 0.902
SENP6
SUMO specific peptidase 6.
    
0.887
ENSSAUP00010020342
annotation not available
    
0.887
ENSSAUP00010067824
annotation not available
    
0.887
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.