STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115570920Sarcoplasmic/endoplasmic reticulum calcium ATPase 1. (994 aa)    
Predicted Functional Partners:
pln
Phospholamban.
   
 0.951
LOC115571620
Cilia- and flagella-associated protein 251-like.
   
 
 0.836
atp5f1a
ATP synthase F1 subunit alpha.
  
 
 0.693
ATP5F1A
ATP synthase subunit alpha, mitochondrial-like.
  
 
 0.693
LOC115586094
Plasma membrane calcium-transporting ATPase 1-like.
  
 
0.692
atp2b1
ATPase plasma membrane Ca2+ transporting 1.
  
 
0.692
atp2b3
ATPase plasma membrane Ca2+ transporting 3.
  
 
0.691
atp2b2
ATPase plasma membrane Ca2+ transporting 2.
  
 
0.691
LOC115583443
Plasma membrane calcium-transporting ATPase 1-like.
  
 
0.689
LOC115587574
Thioredoxin domain-containing protein 3 homolog.
   
 0.653
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.