STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010064364Coiled-coil domain containing 32. (198 aa)    
Predicted Functional Partners:
mrpl20
Mitochondrial ribosomal protein L20.
   
 
 0.923
mrpl41
Mitochondrial ribosomal protein L41.
   
 
 0.922
mrpl32
Mitochondrial ribosomal protein L32.
   
 
 0.920
mrpl40
Mitochondrial ribosomal protein L40.
   
   0.911
mrpl30
Mitochondrial ribosomal protein L30.
   
   0.904
chchd1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
   
 
 0.896
mrps33
Mitochondrial ribosomal protein S33.
   
 
 0.895
ENSSAUP00010068298
Mitochondrial ribosomal protein L47.
   
 
 0.893
mrpl52
Mitochondrial ribosomal protein L52.
   
 
 0.891
ENSSAUP00010003923
Mitochondrial ribosomal protein L21.
   
 
 0.890
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.