STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115583847Protein kinase C and casein kinase substrate in neurons protein 1-like. (447 aa)    
Predicted Functional Partners:
cobl
Cordon-bleu WH2 repeat protein.
    
 
 0.602
ENSSAUP00010016030
annotation not available
   
 
 0.546
sgip1
SH3GL interacting endocytic adaptor 1.
   
 
 0.546
fcho2
FCH and mu domain containing endocytic adaptor 2.
     
0.539
LOC115591098
F-BAR domain only protein 1-like.
     
 0.539
ENSSAUP00010023378
annotation not available
    
 0.509
LOC115575316
Growth arrest-specific protein 7-like.
    
 0.509
ENSSAUP00010064206
Huntingtin.
    
 
 0.412
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.