STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115596959Glutamate receptor ionotropic, delta-1-like. (1052 aa)    
Predicted Functional Partners:
LOC115586915
Glutamate receptor ionotropic, NMDA 2A-like.
    
0.580
GRIN2B
Glutamate ionotropic receptor NMDA type subunit 2B.
    
0.580
LOC115570613
Glutamate receptor ionotropic, NMDA 2C-like.
    
0.580
LOC115575097
Glutamate receptor ionotropic, NMDA 2C-like.
    
0.580
LOC115579192
Glutamate receptor ionotropic, NMDA 2D-like.
    
0.580
ENSSAUP00010051570
Glutamate receptor, ionotropic, N-methyl D-aspartate 2D, b.
    
0.580
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
   
0.567
LOC115591152
Glutamate receptor 2-like.
   
0.567
ENSSAUP00010003177
Glutamate receptor, ionotropic, N-methyl D-aspartate 1b.
   
0.541
grin1
Glutamate ionotropic receptor NMDA type subunit 1.
   
0.541
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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