STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010067139annotation not available (853 aa)    
Predicted Functional Partners:
ENSSAUP00010019818
Heat shock protein 5.
   
 0.862
ankrd45
Ankyrin repeat domain 45.
   
 0.790
ENSSAUP00010003976
Im:7152348.
   
 0.700
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.673
ENSSAUP00010018110
Intersectin 2b.
   
 0.672
ENSSAUP00010040996
Intersectin 2a.
   
 0.672
LOC115593282
TNF receptor-associated factor 2-like.
    
 0.663
ENSSAUP00010024803
Mitogen-activated protein kinase kinase kinase 5.
   
 0.661
LOC115567917
Mitogen-activated protein kinase kinase kinase 5-like.
   
0.661
traf7
TNF receptor associated factor 7.
    
 0.649
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.