STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptgr2Prostaglandin reductase 2. (348 aa)    
Predicted Functional Partners:
fh
Fumarate hydratase.
   
  0.742
ENSSAUP00010042829
succinate-CoA ligase, alpha subunit.
   
 
  0.698
metap1d
Methionyl aminopeptidase type 1D, mitochondrial.
  
  
 0.626
cat
Catalase.
  
  
 0.573
got2
Glutamic-oxaloacetic transaminase 2.
   
 0.564
sdha
Succinate dehydrogenase complex flavoprotein subunit A.
    
  0.553
sdhc
Succinate dehydrogenase complex subunit C.
    
  0.549
acad11
acyl-CoA dehydrogenase family member 11.
  
    0.523
drosha
Drosha ribonuclease III.
   
 
  0.514
fah
Fumarylacetoacetate hydrolase.
    
  0.512
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.