STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLITRK1SLIT and NTRK like family member 1. (704 aa)    
Predicted Functional Partners:
ENSSAUP00010045613
Protein tyrosine phosphatase receptor type Fa.
    
 0.825
ENSSAUP00010060927
annotation not available
    
 0.825
PTPRD
Protein tyrosine phosphatase receptor type D.
    
 0.825
ENSSAUP00010066984
Protein tyrosine phosphatase receptor type Sa.
    
 0.825
ENSSAUP00010067279
Protein tyrosine phosphatase receptor type Fb.
    
 0.825
LOC115591251
Receptor-type tyrosine-protein phosphatase S-like.
    
 0.825
ntng1
Netrin G1.
   
 0.792
LOC115573376
netrin-G1-like.
   
 0.792
ADGRL3
Adhesion G protein-coupled receptor L3.
    
 
 0.719
LOC115572234
Adhesion G protein-coupled receptor L2-like.
    
 
 0.719
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.