STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010067784annotation not available (184 aa)    
Predicted Functional Partners:
wdr18
WD repeat domain 18.
   
 0.617
rhbdl3
Rhomboid like 3.
    
  0.593
tex10
Testis expressed 10.
    
 0.583
ENSSAUP00010059461
Pescadillo.
   
 0.559
LOC115566939
H-2 class II histocompatibility antigen, A-U alpha chain-like.
   
  0.541
LOC115566937
H-2 class II histocompatibility antigen, A-U alpha chain-like.
   
  0.541
ENSSAUP00010006546
Ribosomal protein L30.
    
  0.516
rps14
Ribosomal protein S14.
   
  0.494
cd74
CD74 molecule.
   
  0.494
ripk4
Receptor interacting serine/threonine kinase 4.
   
  0.489
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.