STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FDX1Ferredoxin 1. (165 aa)    
Predicted Functional Partners:
ENSSAUP00010049542
Ferredoxin reductase.
   
 0.972
LOC115582081
Heme-binding protein 1-like.
   
 0.966
FADS6
Fatty acid desaturase 6.
   
 0.963
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.960
ENSSAUP00010058155
NFS1 cysteine desulfurase.
 
 0.958
ndufs2
NADH:ubiquinone oxidoreductase core subunit S2.
  
 
 0.952
ENSSAUP00010032610
Selenocysteine lyase.
  
 0.933
LOC115592346
Cholesterol 7-desaturase-like.
  
 
 0.933
ENSSAUP00010008391
NADH:ubiquinone oxidoreductase core subunit S3.
  
 
 0.932
LOC115591001
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like.
  
 
 0.929
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.