STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010069439Kalirin RhoGEF kinase a. (2894 aa)    
Predicted Functional Partners:
LOC115594335
Rho-related GTP-binding protein RhoG-like.
   
 0.826
rhobtb2
Rho related BTB domain containing 2.
   
 0.826
LOC115569073
Rho-related GTP-binding protein RhoG-like.
   
 0.826
LOC115581235
Rho-related BTB domain-containing protein 2-like.
   
 0.826
LOC115583086
Cell division control protein 42 homolog.
   
 0.822
CDC42
Cell division control protein 42 homolog.
   
 0.822
LOC115575004
Ras-related C3 botulinum toxin substrate 3-like.
   
 0.819
rac3
Rac family small GTPase 3.
   
 0.819
LOC115591868
Ras-related C3 botulinum toxin substrate 2.
   
 0.819
RAC1
Rac family small GTPase 1.
   
 0.819
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.