STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115588618Desmin-like. (488 aa)    
Predicted Functional Partners:
ENSSAUP00010003213
annotation not available
   
 0.738
ENSSAUP00010003231
Barrier to autointegration factor 1.
   
 0.738
lemd3
LEM domain containing 3.
    
 0.612
LOC115584179
RNA-binding protein 39-like.
    
 0.612
rbm39
RNA binding motif protein 39.
    
 0.612
LOC115566939
H-2 class II histocompatibility antigen, A-U alpha chain-like.
    
   0.585
LOC115566937
H-2 class II histocompatibility antigen, A-U alpha chain-like.
    
   0.585
ENSSAUP00010030396
annotation not available
    
 
0.578
ENSSAUP00010030400
annotation not available
    
 
 0.578
tcap
Titin-cap.
   
 
 0.577
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.