STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A9UT03_MONBEPredicted protein. (664 aa)    
Predicted Functional Partners:
A9UZR3_MONBE
Predicted protein.
   
 0.975
A9UT62_MONBE
Predicted protein.
    
 0.947
A9V115_MONBE
Predicted protein.
    
 0.926
A9URC4_MONBE
Predicted protein.
    
 0.901
A9UT75_MONBE
Predicted protein.
   
 0.886
A9V100_MONBE
Predicted protein.
   
 0.886
A9VCV6_MONBE
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.862
A9UUX4_MONBE
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.860
A9UY90_MONBE
Predicted protein.
    
  0.858
A9V5W6_MONBE
Predicted protein.
    
 0.849
Your Current Organism:
Monosiga brevicollis
NCBI taxonomy Id: 81824
Other names: M. brevicollis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.