STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A9UTS8_MONBEPredicted protein. (158 aa)    
Predicted Functional Partners:
A9V661_MONBE
Predicted protein.
   
 0.979
A9VBM0_MONBE
Predicted protein.
   
 0.972
A9UUK4_MONBE
Predicted protein.
    
 0.970
A9VA65_MONBE
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.962
A9V5W6_MONBE
Predicted protein.
   
 0.961
A9V0A0_MONBE
Predicted protein.
    
 0.955
A9UR58_MONBE
Predicted protein.
   
 0.952
A9UYM2_MONBE
Predicted protein.
   
 0.952
A9URC4_MONBE
Predicted protein.
   
  0.947
A9UV49_MONBE
Predicted protein.
    
 0.947
Your Current Organism:
Monosiga brevicollis
NCBI taxonomy Id: 81824
Other names: M. brevicollis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.