A9UUF3_MONBE protein (Monosiga brevicollis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A9UUF3_MONBE

Predicted protein. (634 aa)

Predicted Functional Partners:

A9UZJ8_MONBE

0.996

A9VB52_MONBE

0.995

A9V3V7_MONBE

0.994

KATNAL2

0.962

A9V2F6_MONBE

0.949

A9VBG7_MONBE

0.949

A9VEB9_MONBE

0.947

A9UVC7_MONBE

0.940

A9UPI5_MONBE

0.871

A9V680_MONBE

0.871

Your Current Organism:

Monosiga brevicollis

NCBI taxonomy Id: 81824
Other names: M. brevicollis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A9UPI5_MONBE	A9UUF3_MONBE	A9UPI5	A9UUF3	AAA domain-containing protein; Belongs to the AAA ATPase family.	Predicted protein.	0.871
A9UPI5_MONBE	A9UVC7_MONBE	A9UPI5	A9UVC7	AAA domain-containing protein; Belongs to the AAA ATPase family.	Predicted protein.	0.838
A9UPI5_MONBE	A9UZJ8_MONBE	A9UPI5	A9UZJ8	AAA domain-containing protein; Belongs to the AAA ATPase family.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.878
A9UPI5_MONBE	A9V2F6_MONBE	A9UPI5	A9V2F6	AAA domain-containing protein; Belongs to the AAA ATPase family.	Predicted protein.	0.669
A9UPI5_MONBE	A9V3V7_MONBE	A9UPI5	A9V3V7	AAA domain-containing protein; Belongs to the AAA ATPase family.	Predicted protein.	0.854
A9UPI5_MONBE	A9VB52_MONBE	A9UPI5	A9VB52	AAA domain-containing protein; Belongs to the AAA ATPase family.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.863
A9UPI5_MONBE	A9VBG7_MONBE	A9UPI5	A9VBG7	AAA domain-containing protein; Belongs to the AAA ATPase family.	Predicted protein.	0.669
A9UUF3_MONBE	A9UPI5_MONBE	A9UUF3	A9UPI5	Predicted protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.871
A9UUF3_MONBE	A9UVC7_MONBE	A9UUF3	A9UVC7	Predicted protein.	Predicted protein.	0.940
A9UUF3_MONBE	A9UZJ8_MONBE	A9UUF3	A9UZJ8	Predicted protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.996
A9UUF3_MONBE	A9V2F6_MONBE	A9UUF3	A9V2F6	Predicted protein.	Predicted protein.	0.949
A9UUF3_MONBE	A9V3V7_MONBE	A9UUF3	A9V3V7	Predicted protein.	Predicted protein.	0.994
A9UUF3_MONBE	A9V680_MONBE	A9UUF3	A9V680	Predicted protein.	Predicted protein.	0.871
A9UUF3_MONBE	A9VB52_MONBE	A9UUF3	A9VB52	Predicted protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.995
A9UUF3_MONBE	A9VBG7_MONBE	A9UUF3	A9VBG7	Predicted protein.	Predicted protein.	0.949
A9UUF3_MONBE	A9VEB9_MONBE	A9UUF3	A9VEB9	Predicted protein.	Predicted protein; Belongs to the ubiquitin-conjugating enzyme family.	0.947
A9UUF3_MONBE	KATNAL2	A9UUF3	A9V730	Predicted protein.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.962
A9UVC7_MONBE	A9UPI5_MONBE	A9UVC7	A9UPI5	Predicted protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.838
A9UVC7_MONBE	A9UUF3_MONBE	A9UVC7	A9UUF3	Predicted protein.	Predicted protein.	0.940
A9UVC7_MONBE	A9UZJ8_MONBE	A9UVC7	A9UZJ8	Predicted protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.639