STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A9UXW0_MONBEPredicted protein. (441 aa)    
Predicted Functional Partners:
A9UZT7_MONBE
Predicted protein.
  
 0.620
A9UVN7_MONBE
Predicted protein.
  
 0.618
A9V139_MONBE
Predicted protein.
  
 0.616
A9V857_MONBE
Predicted protein.
  
 0.610
ASB
Arylsulfatase B.
  
 0.557
A9V5D4_MONBE
Predicted protein.
  
 
 0.534
A9UUR0_MONBE
Predicted protein.
  
     0.527
MED6
Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 
 0.526
A9UUZ4_MONBE
Predicted protein.
    
 
 0.517
A9USP4_MONBE
Predicted protein.
  
 
 0.506
Your Current Organism:
Monosiga brevicollis
NCBI taxonomy Id: 81824
Other names: M. brevicollis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.