STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A9UYV7_MONBEPredicted protein. (325 aa)    
Predicted Functional Partners:
A9V8G4_MONBE
Predicted protein.
  
 0.559
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
 
    
 0.473
A9URX7_MONBE
Predicted protein.
   
 0.428
A9VBA8_MONBE
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
   
 0.420
A9USE2_MONBE
Predicted protein.
    
 0.419
A9UYP2_MONBE
Predicted protein.
   
 0.408
A9V2E9_MONBE
Predicted protein.
   
 0.408
A9V5F1_MONBE
Predicted protein.
   
 0.408
A9VBZ4_MONBE
Predicted protein.
   
 0.408
Your Current Organism:
Monosiga brevicollis
NCBI taxonomy Id: 81824
Other names: M. brevicollis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.