STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A9V317_MONBEPredicted protein. (913 aa)    
Predicted Functional Partners:
A9UQ14_MONBE
Tyrosine--tRNA ligase.
  
 
 0.938
A9UP02_MONBE
WHEP-TRS domain-containing protein.
  
 
 0.893
A9URH0_MONBE
Predicted protein.
  
 
 0.893
A9UXT9_MONBE
Predicted protein.
   
 
 0.872
A9URD2_MONBE
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
  
 
 0.804
A9V151_MONBE
Predicted protein.
   
  
 0.796
A9UW56_MONBE
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.756
A9UVA7_MONBE
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.754
A9UP01_MONBE
SAM domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.745
A9UU57_MONBE
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.745
Your Current Organism:
Monosiga brevicollis
NCBI taxonomy Id: 81824
Other names: M. brevicollis
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