STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A9V849_MONBEPredicted protein. (1212 aa)    
Predicted Functional Partners:
A9UYU1_MONBE
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.934
A9V2B6_MONBE
Predicted protein.
    
 0.933
A9V630_MONBE
Predicted protein.
    
 0.762
A9V1N5_MONBE
Predicted protein.
    
  0.760
A9UVC7_MONBE
Predicted protein.
   
 0.746
A9UYP1_MONBE
Predicted protein.
    
 0.707
A9V1B4_MONBE
Predicted protein.
    
 0.703
A9V4D9_MONBE
Predicted protein.
    
 0.703
A9UVV6_MONBE
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.689
ATM
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.667
Your Current Organism:
Monosiga brevicollis
NCBI taxonomy Id: 81824
Other names: M. brevicollis
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