STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A9VDC3_MONBEPredicted protein. (149 aa)    
Predicted Functional Partners:
A9UVW4_MONBE
Predicted protein.
   
 0.997
A9VBD2_MONBE
Predicted protein.
    
 0.993
A9UY62_MONBE
Histone H2B; Belongs to the histone H2B family.
 
 
 0.974
A9UVV6_MONBE
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
 
 
 0.967
A9UZ72_MONBE
Predicted protein.
    
 0.947
A9V8G4_MONBE
Predicted protein.
   
 0.940
A9V3J3_MONBE
Predicted protein.
 
 
 0.882
A9V7A2_MONBE
Predicted protein.
   
 0.870
A9US07_MONBE
Predicted protein.
   
 0.862
A9VA99_MONBE
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
   
 0.853
Your Current Organism:
Monosiga brevicollis
NCBI taxonomy Id: 81824
Other names: M. brevicollis
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