STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN29296.1ABC-type multidrug transport system, ATPase and permease component. (629 aa)    
Predicted Functional Partners:
KRN29295.1
Hypothetical protein.
 
 
0.973
ecfA
Cobalt transporter ATP-binding subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
 
0.920
KRN28647.1
ABC-type multidrug protein lipid transport system, ATPase component.
 
 
0.895
KRN28010.1
ABC transporter, ATP-binding permease.
 
 
0.889
KRN28710.1
ABC-type multidrug transport system, ATPase and permease.
 
 
0.887
KRN28186.1
ABC-type polar amino acid transport system, ATPase component.
 
     
0.883
KRN28743.1
ABC-type antimicrobial peptide transport system, ATPase component.
     
0.869
pstB
ABC-type phosphate transport system, ATPase component; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.817
KRN29294.1
Transcriptional regulator.
       0.707
KRN29287.1
Hypothetical protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
   
   0.696
Your Current Organism:
Lactobacillus selangorensis
NCBI taxonomy Id: 81857
Other names: ATCC BAA-66, CCUG 43347, CIP 106482, DSM 13344, L. selangorensis, LMG 17710, LMG:17710, Lactobacillus selangorensis (Leisner et al. 2000) Haakensen et al. 2011, Lactobacillus sp. LMG17710, Paralactobacillus selangorensis, Paralactobacillus selangorensis Leisner et al. 2000, bacterium LMG17714
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