Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRN29455.1 | KRN29501.1 | IV38_GL000339 | IV38_GL000386 | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | NOL1 NOP2 sun family protein. | 0.893 |
| KRN29455.1 | KRN29734.1 | IV38_GL000339 | IV38_GL000622 | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | GTPase YqeH. | 0.411 |
| KRN29455.1 | rplC | IV38_GL000339 | IV38_GL000013 | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.932 |
| KRN29455.1 | rplD | IV38_GL000339 | IV38_GL000014 | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.918 |
| KRN29455.1 | rplJ | IV38_GL000339 | IV38_GL000082 | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.915 |
| KRN29455.1 | rplM | IV38_GL000339 | IV38_GL000043 | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.927 |
| KRN29455.1 | rplV | IV38_GL000339 | IV38_GL000018 | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.921 |
| KRN29455.1 | rplW | IV38_GL000339 | IV38_GL000015 | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | rplW protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.928 |
| KRN29455.1 | rplX | IV38_GL000339 | IV38_GL000024 | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | rplX protein; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.929 |
| KRN29455.1 | rpmD | IV38_GL000339 | IV38_GL000030 | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Hypothetical protein. | 0.958 |
| KRN29501.1 | KRN29455.1 | IV38_GL000386 | IV38_GL000339 | NOL1 NOP2 sun family protein. | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.893 |
| KRN29501.1 | KRN29734.1 | IV38_GL000386 | IV38_GL000622 | NOL1 NOP2 sun family protein. | GTPase YqeH. | 0.878 |
| KRN29501.1 | rplC | IV38_GL000386 | IV38_GL000013 | NOL1 NOP2 sun family protein. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.876 |
| KRN29501.1 | rplD | IV38_GL000386 | IV38_GL000014 | NOL1 NOP2 sun family protein. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.865 |
| KRN29501.1 | rplJ | IV38_GL000386 | IV38_GL000082 | NOL1 NOP2 sun family protein. | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.889 |
| KRN29501.1 | rplM | IV38_GL000386 | IV38_GL000043 | NOL1 NOP2 sun family protein. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.874 |
| KRN29501.1 | rplV | IV38_GL000386 | IV38_GL000018 | NOL1 NOP2 sun family protein. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.874 |
| KRN29501.1 | rplW | IV38_GL000386 | IV38_GL000015 | NOL1 NOP2 sun family protein. | rplW protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.876 |
| KRN29501.1 | rplX | IV38_GL000386 | IV38_GL000024 | NOL1 NOP2 sun family protein. | rplX protein; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.891 |
| KRN29501.1 | rpmD | IV38_GL000386 | IV38_GL000030 | NOL1 NOP2 sun family protein. | Hypothetical protein. | 0.879 |
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