Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRN29664.1 | KRN29735.1 | IV38_GL000551 | IV38_GL000623 | Hypothetical protein. | Hypothetical protein. | 0.493 |
| KRN29727.1 | KRN29729.1 | IV38_GL000615 | IV38_GL000617 | Metal-binding, possibly nucleic acid-binding protein. | ubiE COQ5 methyltransferase family protein. | 0.850 |
| KRN29727.1 | KRN29731.1 | IV38_GL000615 | IV38_GL000619 | Metal-binding, possibly nucleic acid-binding protein. | Hypothetical protein. | 0.835 |
| KRN29727.1 | KRN29733.1 | IV38_GL000615 | IV38_GL000621 | Metal-binding, possibly nucleic acid-binding protein. | Hypothetical protein. | 0.790 |
| KRN29727.1 | KRN29734.1 | IV38_GL000615 | IV38_GL000622 | Metal-binding, possibly nucleic acid-binding protein. | GTPase YqeH. | 0.844 |
| KRN29727.1 | KRN29735.1 | IV38_GL000615 | IV38_GL000623 | Metal-binding, possibly nucleic acid-binding protein. | Hypothetical protein. | 0.775 |
| KRN29727.1 | nadD | IV38_GL000615 | IV38_GL000620 | Metal-binding, possibly nucleic acid-binding protein. | Nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+) pyrophosphorylase); Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.830 |
| KRN29727.1 | rplT | IV38_GL000615 | IV38_GL000624 | Metal-binding, possibly nucleic acid-binding protein. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.807 |
| KRN29727.1 | rsfS | IV38_GL000615 | IV38_GL000618 | Metal-binding, possibly nucleic acid-binding protein. | Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.826 |
| KRN29727.1 | tmcAL | IV38_GL000615 | IV38_GL000616 | Metal-binding, possibly nucleic acid-binding protein. | Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. | 0.847 |
| KRN29729.1 | KRN29727.1 | IV38_GL000617 | IV38_GL000615 | ubiE COQ5 methyltransferase family protein. | Metal-binding, possibly nucleic acid-binding protein. | 0.850 |
| KRN29729.1 | KRN29731.1 | IV38_GL000617 | IV38_GL000619 | ubiE COQ5 methyltransferase family protein. | Hypothetical protein. | 0.894 |
| KRN29729.1 | KRN29733.1 | IV38_GL000617 | IV38_GL000621 | ubiE COQ5 methyltransferase family protein. | Hypothetical protein. | 0.866 |
| KRN29729.1 | KRN29734.1 | IV38_GL000617 | IV38_GL000622 | ubiE COQ5 methyltransferase family protein. | GTPase YqeH. | 0.810 |
| KRN29729.1 | KRN29735.1 | IV38_GL000617 | IV38_GL000623 | ubiE COQ5 methyltransferase family protein. | Hypothetical protein. | 0.784 |
| KRN29729.1 | nadD | IV38_GL000617 | IV38_GL000620 | ubiE COQ5 methyltransferase family protein. | Nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+) pyrophosphorylase); Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.847 |
| KRN29729.1 | rplT | IV38_GL000617 | IV38_GL000624 | ubiE COQ5 methyltransferase family protein. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.412 |
| KRN29729.1 | rsfS | IV38_GL000617 | IV38_GL000618 | ubiE COQ5 methyltransferase family protein. | Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.949 |
| KRN29729.1 | tmcAL | IV38_GL000617 | IV38_GL000616 | ubiE COQ5 methyltransferase family protein. | Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. | 0.821 |
| KRN29731.1 | KRN29727.1 | IV38_GL000619 | IV38_GL000615 | Hypothetical protein. | Metal-binding, possibly nucleic acid-binding protein. | 0.835 |
page 1 of 5