STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN28605.1Hypothetical protein. (1065 aa)    
Predicted Functional Partners:
KRN29430.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
    0.894
KRN28603.1
Sortase family protein.
 
  
 0.891
KRN28604.1
Hypothetical protein.
 
     0.891
KRN28602.1
Hypothetical protein.
 
  
 0.871
KRN28734.1
Hypothetical protein.
 
 
   0.583
KRN29061.1
Sortase A.
 
  
 0.548
KRN28899.1
Hypothetical protein.
 
 
 0.504
KRN28103.1
Choloylglycine hydrolase.
  
    0.441
KRN28736.1
Hypothetical protein.
 
  
 0.430
KRN28934.1
Hypothetical protein.
  
     0.416
Your Current Organism:
Lactobacillus selangorensis
NCBI taxonomy Id: 81857
Other names: ATCC BAA-66, CCUG 43347, CIP 106482, DSM 13344, L. selangorensis, LMG 17710, LMG:17710, Lactobacillus selangorensis (Leisner et al. 2000) Haakensen et al. 2011, Lactobacillus sp. LMG17710, Paralactobacillus selangorensis, Paralactobacillus selangorensis Leisner et al. 2000, bacterium LMG17714
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.