STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN28645.1MarR family transcriptional regulator. (148 aa)    
Predicted Functional Partners:
KRN29255.1
Beta-glucosides PTS, EIIABC.
   
 
 0.849
KRN29045.1
Hypothetical protein.
   
 
 0.849
KRN28156.1
Beta-glucosides PTS, EIIBCA.
   
 
 0.849
KRN28647.1
ABC-type multidrug protein lipid transport system, ATPase component.
 
     0.842
KRN28646.1
ABC transporter ATP-binding protein.
 
     0.826
KRN28792.1
Beta-glucosides pts, eiibc.
     
 0.512
KRN28919.1
Hypothetical protein.
     
 0.512
KRN28648.1
ABC-type nitrate sulfonate bicarbonate transporter.
       0.450
KRN28649.1
ABC-type nitrate sulfonate bicarbonate transport system, ATPase component.
       0.450
KRN28650.1
ABC transporter permease.
       0.450
Your Current Organism:
Lactobacillus selangorensis
NCBI taxonomy Id: 81857
Other names: ATCC BAA-66, CCUG 43347, CIP 106482, DSM 13344, L. selangorensis, LMG 17710, LMG:17710, Lactobacillus selangorensis (Leisner et al. 2000) Haakensen et al. 2011, Lactobacillus sp. LMG17710, Paralactobacillus selangorensis, Paralactobacillus selangorensis Leisner et al. 2000, bacterium LMG17714
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.