STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN28680.1Glycoside hydrolase. (334 aa)    
Predicted Functional Partners:
KRN27569.1
Hypothetical protein; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.771
KRN27567.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.766
KRN28698.1
Flavodoxin.
 
     0.603
KRN28679.1
Hypothetical protein.
       0.586
KRN28690.1
Flavodoxin.
  
  
  0.565
KRN29394.1
Hypothetical protein.
   
    0.534
KRN28321.1
Gluconokinase; Belongs to the FGGY kinase family.
  
  
 0.506
KRN27571.1
Beta-hexosamidase a, glycoside hydrolase family 3.
    
 0.485
KRN27576.1
Beta-hexosamidase a, glycoside hydrolase family 3.
    
 0.485
KRN28697.1
Glucose-1-dehydrogenase.
 
 
 0.474
Your Current Organism:
Lactobacillus selangorensis
NCBI taxonomy Id: 81857
Other names: ATCC BAA-66, CCUG 43347, CIP 106482, DSM 13344, L. selangorensis, LMG 17710, LMG:17710, Lactobacillus selangorensis (Leisner et al. 2000) Haakensen et al. 2011, Lactobacillus sp. LMG17710, Paralactobacillus selangorensis, Paralactobacillus selangorensis Leisner et al. 2000, bacterium LMG17714
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.