STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN29053.1Hypothetical protein. (80 aa)    
Predicted Functional Partners:
KRN29325.1
Hypothetical protein.
  
     0.742
KRN27656.1
Hypothetical protein.
  
     0.679
KRN29054.1
Hypothetical protein; Belongs to the 'phage' integrase family.
 
     0.642
KRN28435.1
Hypothetical protein.
  
     0.596
KRN29384.1
Hypothetical protein.
  
     0.589
KRN28184.1
Hypothetical protein.
  
     0.534
KRN29174.1
Hypothetical protein.
  
     0.533
KRN29570.1
Hypothetical protein.
  
     0.524
KRN28164.1
Hypothetical protein.
  
     0.500
KRN29503.1
SAM-dependent methyltransferase.
  
     0.467
Your Current Organism:
Lactobacillus selangorensis
NCBI taxonomy Id: 81857
Other names: ATCC BAA-66, CCUG 43347, CIP 106482, DSM 13344, L. selangorensis, LMG 17710, LMG:17710, Lactobacillus selangorensis (Leisner et al. 2000) Haakensen et al. 2011, Lactobacillus sp. LMG17710, Paralactobacillus selangorensis, Paralactobacillus selangorensis Leisner et al. 2000, bacterium LMG17714
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.