STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN28406.1HAD superfamily hydrolase. (267 aa)    
Predicted Functional Partners:
KRN28016.1
HAD superfamily hydrolase.
 
  0.828
KRN27969.1
Hypothetical protein.
  
 
  0.817
KRN27895.1
Hypothetical protein.
 
  0.804
KRN28713.1
HAD superfamily hydrolase.
 
  0.803
KRN28987.1
HAD superfamily hydrolase.
 
 
  0.787
KRN27657.1
Hydrolase of the HAD superfamily protein.
 
 
  0.752
KRN28122.1
Cof-like hydrolase.
 
 
  0.744
KRN28341.1
Mannose-6-phosphate isomerase, class I; Belongs to the mannose-6-phosphate isomerase type 1 family.
  
 
 0.558
KRN29044.1
HAD superfamily hydrolase.
 
 
 
0.553
KRN29507.1
Cof-like hydrolase family protein.
  
 
 
0.508
Your Current Organism:
Lactobacillus selangorensis
NCBI taxonomy Id: 81857
Other names: ATCC BAA-66, CCUG 43347, CIP 106482, DSM 13344, L. selangorensis, LMG 17710, LMG:17710, Lactobacillus selangorensis (Leisner et al. 2000) Haakensen et al. 2011, Lactobacillus sp. LMG17710, Paralactobacillus selangorensis, Paralactobacillus selangorensis Leisner et al. 2000, bacterium LMG17714
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