STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN28475.1Hypothetical protein. (376 aa)    
Predicted Functional Partners:
KRN28572.1
Glycerol kinase.
   
 0.891
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.891
KRN28476.1
DNA-binding response regulator.
  
  
 0.826
KRN28902.1
Hypothetical protein.
   
 
 0.802
KRN28477.1
Hypothetical protein.
  
  
 0.801
KRN29349.1
minC protein; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization.
  
   
 0.795
rplK
50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
   0.781
rpsF
Hypothetical protein; Binds together with S18 to 16S ribosomal RNA.
  
 
 0.777
rplI
rplI protein; Binds to the 23S rRNA.
   
 
 0.730
KRN29166.1
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
   0.725
Your Current Organism:
Lactobacillus selangorensis
NCBI taxonomy Id: 81857
Other names: ATCC BAA-66, CCUG 43347, CIP 106482, DSM 13344, L. selangorensis, LMG 17710, LMG:17710, Lactobacillus selangorensis (Leisner et al. 2000) Haakensen et al. 2011, Lactobacillus sp. LMG17710, Paralactobacillus selangorensis, Paralactobacillus selangorensis Leisner et al. 2000, bacterium LMG17714
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.