STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN28477.1Hypothetical protein. (548 aa)    
Predicted Functional Partners:
KRN28476.1
DNA-binding response regulator.
 0.998
KRN28662.1
Response regulator.
 0.969
KRN27562.1
Response regulator.
 0.944
KRN29251.1
Two-component response regulator.
 0.938
KRN29725.1
Hypothetical protein.
 0.924
KRN28089.1
Winged helix family two component transcriptional regulator.
 0.913
KRN27944.1
Two-component response regulator.
 0.912
KRN28427.1
Response regulator.
 0.909
KRN29430.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.845
KRN28475.1
Hypothetical protein.
  
  
 0.801
Your Current Organism:
Lactobacillus selangorensis
NCBI taxonomy Id: 81857
Other names: ATCC BAA-66, CCUG 43347, CIP 106482, DSM 13344, L. selangorensis, LMG 17710, LMG:17710, Lactobacillus selangorensis (Leisner et al. 2000) Haakensen et al. 2011, Lactobacillus sp. LMG17710, Paralactobacillus selangorensis, Paralactobacillus selangorensis Leisner et al. 2000, bacterium LMG17714
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.