STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN28192.1Hypothetical protein. (302 aa)    
Predicted Functional Partners:
KRN27265.1
Hypothetical protein.
  
  
 
0.928
KRN29610.1
Phosphatidate cytidylyltransferase.
    
 0.910
KRN29618.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
    
 0.910
KRN27765.1
Glycosyl transferases group 1 family protein.
   
 
  0.904
KRN28871.1
Hypothetical protein.
  
 
  0.866
gpsA
gpsA protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.840
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
    
  0.685
KRN28191.1
Glycolate oxidase.
  
 
 0.663
KRN29774.1
Hypothetical protein.
 
 0.570
KRN28193.1
Hypothetical protein.
       0.529
Your Current Organism:
Lactobacillus selangorensis
NCBI taxonomy Id: 81857
Other names: ATCC BAA-66, CCUG 43347, CIP 106482, DSM 13344, L. selangorensis, LMG 17710, LMG:17710, Lactobacillus selangorensis (Leisner et al. 2000) Haakensen et al. 2011, Lactobacillus sp. LMG17710, Paralactobacillus selangorensis, Paralactobacillus selangorensis Leisner et al. 2000, bacterium LMG17714
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.